Module saePisan.view.components.exploration.CorrelationMatrikDialog
Classes
class CorrelationMatrixDialog (parent)-
Expand source code
class CorrelationMatrixDialog(QDialog): """A dialog for selecting variables and generating a correlation matrix using R script. Attributes: parent (QWidget): The parent widget. model1 (Any): The first data model. model2 (Any): The second data model. all_columns_model1 (list): List of all columns in the first data model. all_columns_model2 (list): List of all columns in the second data model. selected_status (dict): Dictionary to store the selected variable status. data_editor_label (QLabel): Label for the data editor section. data_editor_model (QStringListModel): Model for the data editor list view. data_editor_list (QListView): List view for the data editor. data_output_label (QLabel): Label for the data output section. data_output_model (QStringListModel): Model for the data output list view. data_output_list (QListView): List view for the data output. add_button (QPushButton): Button to add selected variables. remove_button (QPushButton): Button to remove selected variables. selected_label (QLabel): Label for the selected variables section. selected_model (QStringListModel): Model for the selected variables list view. selected_list (QListView): List view for the selected variables. correlation_plot_checkbox (QCheckBox): Checkbox to show correlation plot. script_layout (QHBoxLayout): Layout for the R script section. script_label (QLabel): Label for the R script section. icon_label (QLabel): Label to show running icon. script_box (QTextEdit): Text box to display the generated R script. run_button (QPushButton): Button to run the generated R script. Methods: __init__(self, parent): Initializes the dialog with the given parent. set_model(self, model1, model2): Sets the data models for the dialog. get_column_with_dtype(self, model): Returns the columns with their data types. add_variable(self): Adds selected variables to the selected list. remove_variable(self): Removes selected variables from the selected list. get_selected_columns(self): Returns the selected columns without data types. generate_r_script(self): Generates the R script for the correlation matrix. accept(self): Runs the generated R script and handles the result. closeEvent(self, event): Handles the close event of the dialog. """ def __init__(self, parent): super().__init__(parent) self.parent = parent self.model1 = None self.model2 = None self.all_columns_model1 = [] self.all_columns_model2 = [] self.setWindowTitle("Correlation") # Store selected variable status self.selected_status = {} # Main layout self.main_layout = QVBoxLayout(self) content_layout = QHBoxLayout() # Left layout for Data Editor and Data Output left_layout = QVBoxLayout() self.data_editor_label = QLabel("Data Editor", self) self.data_editor_model = QStringListModel() self.data_editor_list = DragDropListView(parent=self) self.data_editor_list.setModel(self.data_editor_model) self.data_editor_list.setSelectionMode(QListView.SelectionMode.MultiSelection) self.data_editor_list.setEditTriggers(QListView.EditTrigger.NoEditTriggers) left_layout.addWidget(self.data_editor_label) left_layout.addWidget(self.data_editor_list) self.data_output_label = QLabel("Data Output", self) self.data_output_model = QStringListModel() self.data_output_list = DragDropListView(parent=self) self.data_output_list.setModel(self.data_output_model) self.data_output_list.setSelectionMode(QListView.SelectionMode.MultiSelection) self.data_output_list.setEditTriggers(QListView.EditTrigger.NoEditTriggers) left_layout.addWidget(self.data_output_label) left_layout.addWidget(self.data_output_list) content_layout.addLayout(left_layout) # Middle layout: Buttons button_layout = QVBoxLayout() self.add_button = QPushButton("🡆", self) self.add_button.clicked.connect(self.add_variable) self.add_button.setFixedSize(50, 35) self.add_button.setStyleSheet("font-size: 24px;") self.remove_button = QPushButton("🡄", self) self.remove_button.clicked.connect(self.remove_variable) self.remove_button.setFixedSize(50, 35) self.remove_button.setStyleSheet("font-size: 24px;") button_layout.addStretch() button_layout.addWidget(self.add_button) button_layout.addWidget(self.remove_button) button_layout.addStretch() content_layout.addLayout(button_layout) # Right layout right_layout = QVBoxLayout() self.selected_label = QLabel("Variables", self) self.selected_model = QStringListModel() self.selected_list = DragDropListView(parent=self) self.selected_list.setModel(self.selected_model) self.selected_list.setSelectionMode(QListView.SelectionMode.MultiSelection) right_layout.addWidget(self.selected_label) right_layout.addWidget(self.selected_list) # Method group with checkboxes method_group = QGroupBox("Methods") method_layout = QVBoxLayout() self.pearson_checkbox = QCheckBox("Pearson") self.spearman_checkbox = QCheckBox("Spearman") self.kendall_checkbox = QCheckBox("Kendall") self.pearson_checkbox.stateChanged.connect(self.generate_r_script) self.spearman_checkbox.stateChanged.connect(self.generate_r_script) self.kendall_checkbox.stateChanged.connect(self.generate_r_script) method_layout.addWidget(self.pearson_checkbox) method_layout.addWidget(self.spearman_checkbox) method_layout.addWidget(self.kendall_checkbox) method_group.setLayout(method_layout) right_layout.addWidget(method_group) # Graph group graph_group = QGroupBox("Visualization") graph_layout = QVBoxLayout() self.correlation_plot_checkbox = QCheckBox("Show Correlation Plot", self) self.correlation_plot_checkbox.stateChanged.connect(self.generate_r_script) graph_layout.addWidget(self.correlation_plot_checkbox) graph_group.setLayout(graph_layout) right_layout.addWidget(graph_group) content_layout.addLayout(right_layout) self.main_layout.addLayout(content_layout) self.script_layout = QHBoxLayout() self.script_label = QLabel("R Script:", self) self.icon_label = QLabel() self.icon_label.setPixmap(QIcon("assets/running.svg").pixmap(QSize(16, 30))) self.icon_label.setFixedSize(16, 30) self.icon_label.setAlignment(Qt.AlignmentFlag.AlignRight | Qt.AlignmentFlag.AlignTop) spacer = QSpacerItem(40, 10, QSizePolicy.Policy.Expanding, QSizePolicy.Policy.Minimum) self.toggle_script_button = QToolButton() self.toggle_script_button.setIcon(QIcon("assets/more.svg")) self.toggle_script_button.setIconSize(QSize(16, 16)) self.toggle_script_button.setCheckable(True) self.toggle_script_button.setChecked(False) self.toggle_script_button.clicked.connect(self.toggle_r_script_visibility) self.button_layout = QHBoxLayout() self.button_layout.addWidget(self.script_label) self.button_layout.addWidget(self.toggle_script_button) self.button_layout.setAlignment(self.script_label, Qt.AlignmentFlag.AlignLeft) self.button_layout.setAlignment(self.toggle_script_button, Qt.AlignmentFlag.AlignLeft) self.script_layout = QHBoxLayout() self.script_layout.addLayout(self.button_layout) self.script_layout.addStretch() self.script_layout.addWidget(self.icon_label) self.icon_label.setVisible(False) self.script_layout.setAlignment(self.script_label, Qt.AlignmentFlag.AlignLeft) self.main_layout.addLayout(self.script_layout) self.script_box = QTextEdit() self.script_box.setSizePolicy(QSizePolicy.Policy.Preferred, QSizePolicy.Policy.Expanding) self.script_box.setReadOnly(False) self.script_box.setVisible(False) self.main_layout.addWidget(self.script_box) # Run button button_row_layout = QHBoxLayout() self.run_button = QPushButton("Run", self) self.run_button.clicked.connect(self.accept) button_row_layout.addWidget(self.run_button, alignment=Qt.AlignmentFlag.AlignRight) self.main_layout.addLayout(button_row_layout) self.data_editor_list.setSelectionMode(QListView.SelectionMode.ExtendedSelection) self.data_output_list.setSelectionMode(QListView.SelectionMode.ExtendedSelection) self.selected_list.setSelectionMode(QListView.SelectionMode.ExtendedSelection) def handle_drop(self, target_widget, items): # Mapping widget to model widget_model_map = { self.data_editor_list: (self.data_editor_model, self.all_columns_model1), self.data_output_list: (self.data_output_model, self.all_columns_model2), self.selected_list: (self.selected_model, None), } if target_widget not in widget_model_map: return target_model, allowed_columns = widget_model_map[target_widget] current_items = target_model.stringList() filtered_items = [] contains_string = any("[String]" in item or "[None]" in item for item in items) for item in items: if "[String]" in item or "[None]" in item: continue if target_widget == self.selected_list: filtered_items.append(item) else: column_name = item.split(" ")[0] if allowed_columns and column_name in [col.split(" ")[0] for col in allowed_columns]: filtered_items.append(item) if contains_string: QMessageBox.warning(self, "Warning", "Selected variables must be of type Numeric.") for item in filtered_items: if item not in current_items: current_items.append(item) for other_widget, (model, _) in widget_model_map.items(): if model == target_model: continue other_items = model.stringList() for item in filtered_items: if item in other_items: other_items.remove(item) model.setStringList(other_items) if target_widget == self.data_editor_list: ordered = [col for col in self.all_columns_model1 if col in current_items] target_model.setStringList(ordered) elif target_widget == self.data_output_list: ordered = [col for col in self.all_columns_model2 if col in current_items] target_model.setStringList(ordered) else: target_model.setStringList(current_items) self.generate_r_script() def set_model(self, model1, model2): self.model1 = model1 self.model2 = model2 self.data_editor_model.setStringList(self.get_column_with_dtype(model1)) self.data_output_model.setStringList(self.get_column_with_dtype(model2)) self.all_columns_model1 = self.get_column_with_dtype(model1) self.all_columns_model2 = self.get_column_with_dtype(model2) def toggle_r_script_visibility(self): """ Toggles the visibility of the R script text edit area and updates the toggle button text. """ is_visible = self.script_box.isVisible() self.script_box.setVisible(not is_visible) if not is_visible: self.toggle_script_button.setIcon(QIcon("assets/less.svg")) else: self.toggle_script_button.setIcon(QIcon("assets/more.svg")) def get_column_with_dtype(self, model): """ Returns a list of columns with simplified data types: String, Numeric, or None. """ self.columns = [] for col, dtype in zip(model.get_data().columns, model.get_data().dtypes): if dtype == pl.Utf8: tipe = "String" elif dtype == pl.Null: tipe = "None" else: tipe = "Numeric" self.columns.append(f"{col} [{tipe}]") return self.columns def add_variable(self): selected_indexes = self.data_editor_list.selectedIndexes() + self.data_output_list.selectedIndexes() selected_items = [index.data() for index in selected_indexes] selected_list = self.selected_model.stringList() contains_invalid = any("[String]" in item or "[None]" in item for item in selected_items) selected_items = [item for item in selected_items if "[Numeric]" in item] if contains_invalid: QMessageBox.warning(self, "Warning", "Selected variables must be of type Numeric.") for item in selected_items: if item in self.data_editor_model.stringList(): editor_list = self.data_editor_model.stringList() editor_list.remove(item) self.data_editor_model.setStringList(editor_list) elif item in self.data_output_model.stringList(): output_list = self.data_output_model.stringList() output_list.remove(item) self.data_output_model.setStringList(output_list) if item not in selected_list: selected_list.append(item) self.selected_model.setStringList(selected_list) self.generate_r_script() def remove_variable(self): """ Removes selected variables from the selected list and generates the R script. """ selected_indexes = self.selected_list.selectedIndexes() selected_items = [index.data() for index in selected_indexes] selected_list = self.selected_model.stringList() editor_list = self.data_editor_model.stringList() output_list = self.data_output_model.stringList() for item in selected_items: column_name = item.split(" ")[0] # Check if the item belongs to model1 (editor) or model2 (output) if column_name in [col.split(" ")[0] for col in self.all_columns_model1]: if item not in editor_list: editor_list.append(item) # Re-sort according to all_columns_model1 editor_list = [col for col in self.all_columns_model1 if col in editor_list] elif column_name in [col.split(" ")[0] for col in self.all_columns_model2]: if item not in output_list: output_list.append(item) # Re-sort according to all_columns_model2 output_list = [col for col in self.all_columns_model2 if col in output_list] # Remove from selected if item in selected_list: selected_list.remove(item) self.selected_model.setStringList(selected_list) self.data_editor_model.setStringList(editor_list) self.data_output_model.setStringList(output_list) self.generate_r_script() def get_selected_columns(self): return [item.rsplit(" [String]", 1)[0].rsplit(" [Numeric]", 1)[0] for item in self.selected_model.stringList()] def generate_r_script(self): """Function to generate R script for Correlation Matrix using ggcorrplot""" selected_columns = self.get_selected_columns() if not selected_columns: self.script_box.setPlainText("") return formatted_columns = ', '.join(f'"{col}"' for col in selected_columns) r_script = "" # Step 1: Generate the correlation matrix and plots based on selected methods for method, checkbox in [("pearson", self.pearson_checkbox), ("spearman", self.spearman_checkbox), ("kendall", self.kendall_checkbox)]: if checkbox.isChecked(): correlation_matrix_method = f"correlation_matrix_{method}" r_script += ( f"{correlation_matrix_method} <- cor(data[, c({formatted_columns})], " f"use='complete.obs', method='{method}')\n" ) # Only generate the plot if the plot checkbox is checked if self.correlation_plot_checkbox.isChecked(): r_script += ( f"correlation_plot_{method} <- ggcorrplot({correlation_matrix_method}, " f"method = 'square', type = 'upper', lab = TRUE) + " f"ggtitle('{method.title()} Correlation Matrix')\n\n" ) self.script_box.setPlainText(r_script) def accept(self): r_script = self.script_box.toPlainText() if not r_script: QMessageBox.warning(self, "Empty Script", "Please generate a script before running.") return self.run_button.setEnabled(False) self.run_button.setText("Running...") self.icon_label.setVisible(True) correlation_matrix = CorrelationMatrix(self.model1, self.model2) controller = CorrelationMatrixController(correlation_matrix) controller.run_model(r_script) if not correlation_matrix.error: QMessageBox.information(self, "Correlation Matrix", "Exploration has been completed.") else: QMessageBox.warning(self, "Correlation Matrix", correlation_matrix.result) # self.parent.add_output(script_text = r_script, result_text = correlation_matrix.result ,plot_paths = correlation_matrix.plot) display_script_and_output(self.parent, r_script, correlation_matrix.result, correlation_matrix.plot) self.parent.tab_widget.setCurrentWidget(self.parent.output_tab) self.icon_label.setVisible(False) self.run_button.setText("Run") self.run_button.setEnabled(True) self.close() def closeEvent(self, event): self.selected_model.setStringList([]) self.script_box.setPlainText("") event.accept()A dialog for selecting variables and generating a correlation matrix using R script.
Attributes
parent:QWidget- The parent widget.
model1:Any- The first data model.
model2:Any- The second data model.
all_columns_model1:list- List of all columns in the first data model.
all_columns_model2:list- List of all columns in the second data model.
selected_status:dict- Dictionary to store the selected variable status.
data_editor_label:QLabel- Label for the data editor section.
data_editor_model:QStringListModel- Model for the data editor list view.
data_editor_list:QListView- List view for the data editor.
data_output_label:QLabel- Label for the data output section.
data_output_model:QStringListModel- Model for the data output list view.
data_output_list:QListView- List view for the data output.
add_button:QPushButton- Button to add selected variables.
remove_button:QPushButton- Button to remove selected variables.
selected_label:QLabel- Label for the selected variables section.
selected_model:QStringListModel- Model for the selected variables list view.
selected_list:QListView- List view for the selected variables.
correlation_plot_checkbox:QCheckBox- Checkbox to show correlation plot.
script_layout:QHBoxLayout- Layout for the R script section.
script_label:QLabel- Label for the R script section.
icon_label:QLabel- Label to show running icon.
script_box:QTextEdit- Text box to display the generated R script.
run_button:QPushButton- Button to run the generated R script.
Methods
init(self, parent): Initializes the dialog with the given parent. set_model(self, model1, model2): Sets the data models for the dialog. get_column_with_dtype(self, model): Returns the columns with their data types. add_variable(self): Adds selected variables to the selected list. remove_variable(self): Removes selected variables from the selected list. get_selected_columns(self): Returns the selected columns without data types. generate_r_script(self): Generates the R script for the correlation matrix. accept(self): Runs the generated R script and handles the result. closeEvent(self, event): Handles the close event of the dialog.
Ancestors
- PyQt6.QtWidgets.QDialog
- PyQt6.QtWidgets.QWidget
- PyQt6.QtCore.QObject
- PyQt6.sip.wrapper
- PyQt6.QtGui.QPaintDevice
- PyQt6.sip.simplewrapper
Methods
def accept(self)-
Expand source code
def accept(self): r_script = self.script_box.toPlainText() if not r_script: QMessageBox.warning(self, "Empty Script", "Please generate a script before running.") return self.run_button.setEnabled(False) self.run_button.setText("Running...") self.icon_label.setVisible(True) correlation_matrix = CorrelationMatrix(self.model1, self.model2) controller = CorrelationMatrixController(correlation_matrix) controller.run_model(r_script) if not correlation_matrix.error: QMessageBox.information(self, "Correlation Matrix", "Exploration has been completed.") else: QMessageBox.warning(self, "Correlation Matrix", correlation_matrix.result) # self.parent.add_output(script_text = r_script, result_text = correlation_matrix.result ,plot_paths = correlation_matrix.plot) display_script_and_output(self.parent, r_script, correlation_matrix.result, correlation_matrix.plot) self.parent.tab_widget.setCurrentWidget(self.parent.output_tab) self.icon_label.setVisible(False) self.run_button.setText("Run") self.run_button.setEnabled(True) self.close()accept(self)
def add_variable(self)-
Expand source code
def add_variable(self): selected_indexes = self.data_editor_list.selectedIndexes() + self.data_output_list.selectedIndexes() selected_items = [index.data() for index in selected_indexes] selected_list = self.selected_model.stringList() contains_invalid = any("[String]" in item or "[None]" in item for item in selected_items) selected_items = [item for item in selected_items if "[Numeric]" in item] if contains_invalid: QMessageBox.warning(self, "Warning", "Selected variables must be of type Numeric.") for item in selected_items: if item in self.data_editor_model.stringList(): editor_list = self.data_editor_model.stringList() editor_list.remove(item) self.data_editor_model.setStringList(editor_list) elif item in self.data_output_model.stringList(): output_list = self.data_output_model.stringList() output_list.remove(item) self.data_output_model.setStringList(output_list) if item not in selected_list: selected_list.append(item) self.selected_model.setStringList(selected_list) self.generate_r_script() def closeEvent(self, event)-
Expand source code
def closeEvent(self, event): self.selected_model.setStringList([]) self.script_box.setPlainText("") event.accept()closeEvent(self, a0: Optional[QCloseEvent])
def generate_r_script(self)-
Expand source code
def generate_r_script(self): """Function to generate R script for Correlation Matrix using ggcorrplot""" selected_columns = self.get_selected_columns() if not selected_columns: self.script_box.setPlainText("") return formatted_columns = ', '.join(f'"{col}"' for col in selected_columns) r_script = "" # Step 1: Generate the correlation matrix and plots based on selected methods for method, checkbox in [("pearson", self.pearson_checkbox), ("spearman", self.spearman_checkbox), ("kendall", self.kendall_checkbox)]: if checkbox.isChecked(): correlation_matrix_method = f"correlation_matrix_{method}" r_script += ( f"{correlation_matrix_method} <- cor(data[, c({formatted_columns})], " f"use='complete.obs', method='{method}')\n" ) # Only generate the plot if the plot checkbox is checked if self.correlation_plot_checkbox.isChecked(): r_script += ( f"correlation_plot_{method} <- ggcorrplot({correlation_matrix_method}, " f"method = 'square', type = 'upper', lab = TRUE) + " f"ggtitle('{method.title()} Correlation Matrix')\n\n" ) self.script_box.setPlainText(r_script)Function to generate R script for Correlation Matrix using ggcorrplot
def get_column_with_dtype(self, model)-
Expand source code
def get_column_with_dtype(self, model): """ Returns a list of columns with simplified data types: String, Numeric, or None. """ self.columns = [] for col, dtype in zip(model.get_data().columns, model.get_data().dtypes): if dtype == pl.Utf8: tipe = "String" elif dtype == pl.Null: tipe = "None" else: tipe = "Numeric" self.columns.append(f"{col} [{tipe}]") return self.columnsReturns a list of columns with simplified data types: String, Numeric, or None.
def get_selected_columns(self)-
Expand source code
def get_selected_columns(self): return [item.rsplit(" [String]", 1)[0].rsplit(" [Numeric]", 1)[0] for item in self.selected_model.stringList()] def handle_drop(self, target_widget, items)-
Expand source code
def handle_drop(self, target_widget, items): # Mapping widget to model widget_model_map = { self.data_editor_list: (self.data_editor_model, self.all_columns_model1), self.data_output_list: (self.data_output_model, self.all_columns_model2), self.selected_list: (self.selected_model, None), } if target_widget not in widget_model_map: return target_model, allowed_columns = widget_model_map[target_widget] current_items = target_model.stringList() filtered_items = [] contains_string = any("[String]" in item or "[None]" in item for item in items) for item in items: if "[String]" in item or "[None]" in item: continue if target_widget == self.selected_list: filtered_items.append(item) else: column_name = item.split(" ")[0] if allowed_columns and column_name in [col.split(" ")[0] for col in allowed_columns]: filtered_items.append(item) if contains_string: QMessageBox.warning(self, "Warning", "Selected variables must be of type Numeric.") for item in filtered_items: if item not in current_items: current_items.append(item) for other_widget, (model, _) in widget_model_map.items(): if model == target_model: continue other_items = model.stringList() for item in filtered_items: if item in other_items: other_items.remove(item) model.setStringList(other_items) if target_widget == self.data_editor_list: ordered = [col for col in self.all_columns_model1 if col in current_items] target_model.setStringList(ordered) elif target_widget == self.data_output_list: ordered = [col for col in self.all_columns_model2 if col in current_items] target_model.setStringList(ordered) else: target_model.setStringList(current_items) self.generate_r_script() def remove_variable(self)-
Expand source code
def remove_variable(self): """ Removes selected variables from the selected list and generates the R script. """ selected_indexes = self.selected_list.selectedIndexes() selected_items = [index.data() for index in selected_indexes] selected_list = self.selected_model.stringList() editor_list = self.data_editor_model.stringList() output_list = self.data_output_model.stringList() for item in selected_items: column_name = item.split(" ")[0] # Check if the item belongs to model1 (editor) or model2 (output) if column_name in [col.split(" ")[0] for col in self.all_columns_model1]: if item not in editor_list: editor_list.append(item) # Re-sort according to all_columns_model1 editor_list = [col for col in self.all_columns_model1 if col in editor_list] elif column_name in [col.split(" ")[0] for col in self.all_columns_model2]: if item not in output_list: output_list.append(item) # Re-sort according to all_columns_model2 output_list = [col for col in self.all_columns_model2 if col in output_list] # Remove from selected if item in selected_list: selected_list.remove(item) self.selected_model.setStringList(selected_list) self.data_editor_model.setStringList(editor_list) self.data_output_model.setStringList(output_list) self.generate_r_script()Removes selected variables from the selected list and generates the R script.
def set_model(self, model1, model2)-
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def set_model(self, model1, model2): self.model1 = model1 self.model2 = model2 self.data_editor_model.setStringList(self.get_column_with_dtype(model1)) self.data_output_model.setStringList(self.get_column_with_dtype(model2)) self.all_columns_model1 = self.get_column_with_dtype(model1) self.all_columns_model2 = self.get_column_with_dtype(model2) def toggle_r_script_visibility(self)-
Expand source code
def toggle_r_script_visibility(self): """ Toggles the visibility of the R script text edit area and updates the toggle button text. """ is_visible = self.script_box.isVisible() self.script_box.setVisible(not is_visible) if not is_visible: self.toggle_script_button.setIcon(QIcon("assets/less.svg")) else: self.toggle_script_button.setIcon(QIcon("assets/more.svg"))Toggles the visibility of the R script text edit area and updates the toggle button text.